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bump samplesheet-parser to v1.3.0 for latest features#11792

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chaitanyakasaraneni merged 1 commit into
nf-core:masterfrom
chaitanyakasaraneni:bump-package-version
Jun 1, 2026
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bump samplesheet-parser to v1.3.0 for latest features#11792
chaitanyakasaraneni merged 1 commit into
nf-core:masterfrom
chaitanyakasaraneni:bump-package-version

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@chaitanyakasaraneni chaitanyakasaraneni commented May 30, 2026

This pull request upgrades the samplesheet-parser dependency from version 1.2.0 to 1.3.0 across both the "info" and "validate" modules. The update is reflected in the conda environments, container image references, and related test snapshots.

Dependency and container updates:

  • Updated samplesheet-parser version from 1.2.0 to 1.3.0 in both environment.yml files for the "info" and "validate" modules.
  • Updated container image references in main.nf for both modules to use the new samplesheet-parser:1.3.0 image. [1] [2]

Test snapshot updates:

  • Updated test snapshots in main.nf.test.snap files for both modules to reflect the new samplesheet-parser version and corresponding timestamps. [1] [2] [3] [4] [5] [6]

PR checklist

Closes #XXX

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
  • Broadcast software version numbers to topic: versions - See version_topics
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • nf-core modules test <MODULE> --profile docker
      • nf-core modules test <MODULE> --profile singularity
      • nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • nf-core subworkflows test <SUBWORKFLOW> --profile conda

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@dialvarezs dialvarezs left a comment

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LGTM!

@chaitanyakasaraneni chaitanyakasaraneni added this pull request to the merge queue Jun 1, 2026
Merged via the queue into nf-core:master with commit 202cde4 Jun 1, 2026
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@chaitanyakasaraneni chaitanyakasaraneni deleted the bump-package-version branch June 1, 2026 13:34
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2 participants