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πŸš€ GPU-Accelerated Data Science

Instantly speed up your Python data science workflows with simple drop-in GPU accelerations. This project demonstrates seven powerful ways to accelerate common data science libraries with minimal code changes.

οΏ½ Key Features

  • Drop-in replacements for popular libraries
  • Minimal code changes required
  • Interactive GUI for exploration
  • Comprehensive examples from beginner to advanced
  • Real-world performance benchmarks

πŸ“Š Performance Improvements

1. Pandas with cuDF (10-100x speedup)

# Before: Regular pandas
import pandas as pd
df = pd.read_csv("large_dataset.csv")

# After: GPU-accelerated pandas
%load_ext cudf.pandas
import pandas as pd  # Same import!
df = pd.read_csv("large_dataset.csv")  # Same code!

Real-world improvements:

  • Loading 1GB CSV: 30s β†’ 3s
  • GroupBy operations: 45s β†’ 0.5s
  • Sorting large datasets: 25s β†’ 0.3s

2. Polars with GPU Engine (2-20x speedup)

# Before: Regular Polars
from polars import scan_csv
df = scan_csv("large_dataset.csv").collect()

# After: GPU-powered Polars
from polars import scan_csv
df = scan_csv("large_dataset.csv").collect(engine="gpu")  # Specify GPU engine

Performance gains:

  • 100M row aggregation: 4s β†’ 0.2s
  • Complex queries: 10s β†’ 0.5s
  • Memory efficiency: 2x better

3. Scikit-learn with cuML (5-100x speedup)

# Before: CPU training
from sklearn.ensemble import RandomForestClassifier

# After: GPU acceleration
%load_ext cuml.accel
from sklearn.ensemble import RandomForestClassifier  # Same import!

Speed improvements:

  • RandomForest (500K samples): 120s β†’ 2s
  • K-Means clustering: 45s β†’ 0.9s
  • Cross-validation: 300s β†’ 6s

4. XGBoost GPU Acceleration (3-15x speedup)

# Before: CPU training
from xgboost import XGBRegressor
model = XGBRegressor()

# After: GPU power
from xgboost import XGBRegressor
model = XGBRegressor(tree_method='gpu_hist')  # Specify GPU algorithm

Real-world gains:

  • Training (1M samples): 300s β†’ 25s
  • Prediction: 10s β†’ 0.8s
  • Hyperparameter tuning: 2x faster

5. UMAP with cuML (10-50x speedup)

# Enable GPU acceleration
%load_ext cuml.accel

# Your UMAP code stays the same!
import umap
reducer = umap.UMAP()  # Automatically uses GPU!

Performance boost:

  • 100K samples: 180s β†’ 4s
  • 1M samples: 1800s β†’ 40s
  • Memory usage: 75% reduction

6. HDBSCAN Acceleration (5-30x speedup)

# Enable GPU acceleration
%load_ext cuml.accel

# Same HDBSCAN code
import hdbscan
clusterer = hdbscan.HDBSCAN()  # Automatically uses GPU!

Improvements:

  • 100K points: 45s β†’ 1.5s
  • 1M points: 600s β†’ 20s
  • Interactive exploration possible

7. NetworkX with cuGraph (10-100x speedup)

# Enable GPU acceleration
%env NX_CUGRAPH_AUTOCONFIG=True

# Your NetworkX code stays the same!
import networkx as nx
centrality = nx.betweenness_centrality(G)  # Automatically uses GPU!

Speed gains:

  • Pagerank (1M nodes): 300s β†’ 3s
  • Path finding: 120s β†’ 1.2s
  • Community detection: 600s β†’ 8s

πŸš€ Getting Started

Hardware Compatibility

NVIDIA GPUs (Recommended)

  • NVIDIA GPU with CUDA support
  • CUDA Toolkit 11.x or later
  • Works with all examples out of the box

AMD GPUs (Limited Support)

  • Some features available through ROCm/HIP
  • Supported libraries:
    • PyTorch with ROCm backend
    • TensorFlow with ROCm support
    • Limited support for XGBoost
  • Not supported:
    • RAPIDS ecosystem (cuDF, cuML, cuGraph)
    • NVIDIA-specific optimizations

Note: For full functionality and best performance, an NVIDIA GPU is recommended. AMD GPU support is limited and may require different code paths or alternative libraries.

Prerequisites

  • Python 3.8+
  • For NVIDIA: CUDA Toolkit 11.x or later
  • For AMD: ROCm 5.0+ (limited functionality)

Quick Installation

# Clone repository
git clone https://github.com/yourusername/gpu-accelerated-data-science.git
cd gpu-accelerated-data-science

# Create virtual environment
python -m venv venv
source venv/bin/activate  # Windows: venv\Scripts\activate

# Install dependencies
pip install -r requirements.txt --extra-index-url https://pypi.nvidia.com

# Launch GUI
./run_gui.sh

πŸ“š Examples and Documentation

Interactive Examples

  1. Beginner Tutorials 🌱

  2. Intermediate Examples 🌿

  3. Advanced Topics 🌳

Documentation

πŸ› οΈ Best Practices

Data Transfer Optimization

  • Keep data on GPU when possible
  • Batch operations to minimize transfers
  • Use GPU-native formats (cuDF, Arrow)

Memory Management

  • Monitor GPU memory usage
  • Use streaming for large datasets
  • Clear unused variables

Operation Selection

  • Profile operations before GPU migration
  • Some operations are faster on CPU
  • Consider data size thresholds

🀝 Contributing

We welcome contributions! See CONTRIBUTING.md for guidelines.

πŸ”— Resources

About

This repository contains examples of how to accelerate common Python data science libraries using NVIDIA GPUs. Each notebook demonstrates a different library and shows how to enable GPU (CUDA) acceleration with minimal code changes.

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