Prepare v0.1.1 packaging release

Cargo.toml

@@ -1,6 +1,6 @@
 [package]
 name = "fastaguard"
-version = "0.1.0"
+version = "0.1.1"
 edition = "2021"
 license = "MIT"
 description = "FASTA preflight QC for assembly pipelines"

README.md

@@ -140,6 +140,7 @@ FastaGuard catches FASTA-level assembly problems before expensive assembly QC.
 - [LLM and tooling vision](docs/llm-tooling-vision.md)
 - [Benchmarking](docs/benchmarking.md)
 - [Packaging](docs/packaging.md)
+- [v0.1.1 release notes](docs/releases/v0.1.1.md)
 - [v0.1.0 release notes](docs/releases/v0.1.0.md)
 - [Roadmap](docs/roadmap.md)
 - [First-release design](docs/superpowers/specs/2026-05-18-fastaguard-first-release-design.md)

docs/packaging.md

@@ -58,8 +58,8 @@ For the first public release:
 1. Tag the release:
 
    ```bash
-   git tag v0.1.0
-   git push origin v0.1.0
+   git tag v0.1.1
+   git push origin v0.1.1
    ```
 
 2. Push the tag to trigger `.github/workflows/release.yml`.
@@ -120,7 +120,7 @@ Once the Bioconda recipe is merged upstream, BioContainers can build the corresp
 
 ## MultiQC
 
-FastaGuard v0.1.0 emits MultiQC custom content as `fastaguard_mqc.json`.
+FastaGuard emits MultiQC custom content as `fastaguard_mqc.json`.
 
 A native MultiQC plugin starter now lives in:
 

docs/releases/v0.1.1.md

@@ -0,0 +1,45 @@
+# FastaGuard v0.1.1
+
+FastaGuard v0.1.1 is a packaging metadata release for downstream adoption.
+
+The CLI behavior remains assembly-focused and compatible with v0.1.0. The
+important change is that the source tree now includes the metadata needed for a
+clean Bioconda submission.
+
+## Highlights
+
+- Adds an MIT `LICENSE` file to the source archive.
+- Adds Bioconda recipe scaffolding under `packaging/bioconda/`.
+- Adds a native MultiQC plugin starter under `integrations/multiqc/`.
+- Adds adoption, tool landscape, and benchmark evidence planning docs.
+- Updates CI and release workflows to Node 24-compatible GitHub action versions.
+
+## Install From Release Assets
+
+Download the archive for your platform, unpack it, and place `fastaguard` on
+`PATH`:
+
+```bash
+tar -xzf fastaguard-v0.1.1-x86_64-unknown-linux-gnu.tar.gz
+./fastaguard-v0.1.1-x86_64-unknown-linux-gnu/fastaguard --help
+```
+
+## Bioconda Note
+
+This release is intended to be the first source archive suitable for Bioconda:
+it contains the project license file and the stable v0.1 FASTA preflight
+contract commands:
+
+```bash
+fastaguard --help
+fastaguard --schema
+fastaguard --finding-catalog
+```
+
+## Known Limits
+
+- v0.1.1 still supports the `assembly` profile only.
+- FastaGuard does not estimate biological completeness, taxonomic
+  contamination, or assembly correctness.
+- Bioconda submission still requires the public source archive SHA256 to be
+  recorded in the recipe.

examples/reports/assembly_fail/fastaguard.json

@@ -2,7 +2,7 @@
   "schema_version": "0.1.0",
   "tool": {
     "name": "FastaGuard",
-    "version": "0.1.0"
+    "version": "0.1.1"
   },
   "input": {
     "path": "testdata/problem_assembly.fa",

examples/reports/assembly_fail/fastaguard_report.html

@@ -363,7 +363,7 @@ <h2>JSON</h2>
   &quot;schema_version&quot;: &quot;0.1.0&quot;,
   &quot;tool&quot;: {
     &quot;name&quot;: &quot;FastaGuard&quot;,
-    &quot;version&quot;: &quot;0.1.0&quot;
+    &quot;version&quot;: &quot;0.1.1&quot;
   },
   &quot;input&quot;: {
     &quot;path&quot;: &quot;testdata/problem_assembly.fa&quot;,

examples/reports/assembly_pass/fastaguard.json

@@ -2,7 +2,7 @@
   "schema_version": "0.1.0",
   "tool": {
     "name": "FastaGuard",
-    "version": "0.1.0"
+    "version": "0.1.1"
   },
   "input": {
     "path": "testdata/valid_assembly.fa",

examples/reports/assembly_pass/fastaguard_report.html

@@ -123,7 +123,7 @@ <h2>JSON</h2>
   &quot;schema_version&quot;: &quot;0.1.0&quot;,
   &quot;tool&quot;: {
     &quot;name&quot;: &quot;FastaGuard&quot;,
-    &quot;version&quot;: &quot;0.1.0&quot;
+    &quot;version&quot;: &quot;0.1.1&quot;
   },
   &quot;input&quot;: {
     &quot;path&quot;: &quot;testdata/valid_assembly.fa&quot;,

packaging/bioconda/meta.yaml

@@ -1,5 +1,5 @@
 {% set name = "fastaguard" %}
-{% set version = "0.1.0" %}
+{% set version = "0.1.1" %}
 
 package:
   name: {{ name|lower }}

tests/golden/invalid_empty_record.json

@@ -2,7 +2,7 @@
   "schema_version": "0.1.0",
   "tool": {
     "name": "FastaGuard",
-    "version": "0.1.0"
+    "version": "0.1.1"
   },
   "input": {
     "path": "testdata/invalid_empty_record.fa",

tests/golden/problem_assembly.json

@@ -2,7 +2,7 @@
   "schema_version": "0.1.0",
   "tool": {
     "name": "FastaGuard",
-    "version": "0.1.0"
+    "version": "0.1.1"
   },
   "input": {
     "path": "testdata/problem_assembly.fa",

tests/golden/valid_assembly.json

@@ -2,7 +2,7 @@
   "schema_version": "0.1.0",
   "tool": {
     "name": "FastaGuard",
-    "version": "0.1.0"
+    "version": "0.1.1"
   },
   "input": {
     "path": "testdata/valid_assembly.fa",

tests/python/test_release_metadata.py

@@ -0,0 +1,27 @@
+import tomllib
+import unittest
+from pathlib import Path
+
+
+ROOT = Path(__file__).resolve().parents[2]
+
+
+class ReleaseMetadataTest(unittest.TestCase):
+    def test_package_and_bioconda_recipe_target_v0_1_1(self):
+        cargo = tomllib.loads((ROOT / "Cargo.toml").read_text())
+        recipe = (ROOT / "packaging" / "bioconda" / "meta.yaml").read_text()
+
+        self.assertEqual(cargo["package"]["version"], "0.1.1")
+        self.assertIn('{% set version = "0.1.1" %}', recipe)
+
+    def test_v0_1_1_release_notes_exist(self):
+        notes = ROOT / "docs" / "releases" / "v0.1.1.md"
+
+        self.assertTrue(notes.exists())
+        text = notes.read_text()
+        self.assertIn("FastaGuard v0.1.1", text)
+        self.assertIn("packaging metadata", text)
+
+
+if __name__ == "__main__":
+    unittest.main()