[UPDATE PRIMITIVE] Resolve workflow-prompt query/pack paths across all workspace folders + include/exclude settings#307

Copilot wants to merge 2 commits into

mainadvanced-security/codeql-development-mcp-server:mainfrom

copilot/fix-mcp-workflow-promptsadvanced-security/codeql-development-mcp-server:copilot/fix-mcp-workflow-promptsCopy head branch name to clipboard