Remove ImageJ-isms

While the ImageJ2 project incubated much of the SciJava Common
functionality, that functionality is no longer limited to just ImageJ.
This commit updates the language accordingly in various places.

Author: ctrueden

src/main/java/org/scijava/command/CommandInfo.java

@@ -72,8 +72,8 @@
  * @author Grant Harris
  * @see ModuleInfo - The interface which provides many methods for interrogating
  *      structural details of a {@link Module}.
- * @see CommandModule - An adapter class that bridges the gap between ImageJ
- *      commands and the rich {@link Module} interface.
+ * @see CommandModule - An adapter class that bridges the gap between
+ *      {@link Command}s and the rich {@link Module} interface.
  */
 public class CommandInfo extends PluginInfo<Command> implements ModuleInfo {
 

src/main/java/org/scijava/command/CommandModule.java

@@ -54,21 +54,21 @@
  * with inputs and outputs.
  * </p>
  * <p>
- * Conceptually, an ImageJ command is such a piece of functionality. However,
- * the {@link Command} interface is intended to be as simple to implement as
+ * Conceptually, a command is such a piece of functionality. However, the
+ * {@link Command} interface is intended to be as simple to implement as
  * possible; the only required method is {@link Command#run()}, which is
  * inherited from {@link Runnable}. The command's inputs and outputs are
  * indicated using @{@link Parameter} annotations.
  * </p>
  * <p>
- * To bridge the gap, this class adapts an ImageJ {@link Command} instance into
- * an object that fully implements the {@link Module} interface.
+ * To bridge the gap, this class adapts a {@link Command} instance into an
+ * object that fully implements the {@link Module} interface.
  * </p>
  * 
  * @author Curtis Rueden
  * @author Johannes Schindelin
  * @author Grant Harris
- * @see CommandInfo - An adapter class that bridges the gap between ImageJ
+ * @see CommandInfo - An adapter class that bridges the gap between SciJava
  *      commands and the rich {@link ModuleInfo} interface.
  * @see Module - The interface which provides many methods for interrogating an
  *      encapsulated piece of functionality with inputs and outputs.

src/main/java/org/scijava/command/ContextCommand.java

@@ -35,11 +35,10 @@
 import org.scijava.Cancelable;
 
 /**
- * An ImageJ command that knows its context. Its service parameters are
- * automatically populated when {@link #setContext} is called, to make it easier
- * to use via Java API calls (i.e., without invoking it via
- * {@link CommandService#run}). This improves compile-time safety of downstream
- * code that calls the command.
+ * A command that knows its context. Its service parameters are automatically
+ * populated when {@link #setContext} is called, to make it easier to use via
+ * Java API calls (i.e., without invoking it via {@link CommandService#run}).
+ * This improves compile-time safety of downstream code that calls the command.
  * <p>
  * Here is an example command execution using {@link CommandService#run}:
  * </p>

src/main/java/org/scijava/command/DynamicCommand.java

@@ -42,10 +42,10 @@
 import org.scijava.util.ClassUtils;
 
 /**
- * An ImageJ command with a variable number of inputs and outputs. This class
- * provides greater configurability, but also greater complexity, than
- * implementing the {@link Command} interface and using only @{@link Parameter}
- * annotations on instance fields.
+ * A command with a variable number of inputs and outputs. This class provides
+ * greater configurability, but also greater complexity, than implementing the
+ * {@link Command} interface and using only @{@link Parameter} annotations on
+ * instance fields.
  * 
  * @author Curtis Rueden
  */

src/main/java/org/scijava/command/InteractiveCommand.java

@@ -43,7 +43,7 @@
 import org.scijava.thread.ThreadService;
 
 /**
- * An ImageJ command intended to be run interactively.
+ * A command intended to be run interactively.
  * <p>
  * It is {@link Interactive} and {@link Previewable}, with the previews used for
  * interactive exploration.

src/main/java/org/scijava/command/ModuleCommand.java

@@ -39,9 +39,9 @@
 import org.scijava.plugin.Parameter;
 
 /**
- * An ImageJ command which implements {@link Module} directly (rather than using
- * the {@link CommandModule} adapter class). This is useful for commands which
- * want to inspect and manipulate their own inputs and outputs programmatically.
+ * A command which implements {@link Module} directly (rather than using the
+ * {@link CommandModule} adapter class). This is useful for commands which want
+ * to inspect and manipulate their own inputs and outputs programmatically.
  * 
  * @author Curtis Rueden
  */

src/main/java/org/scijava/console/ConsoleService.java

@@ -50,10 +50,7 @@ public interface ConsoleService extends
 	HandlerService<LinkedList<String>, ConsoleArgument>, SciJavaService
 {
 
-	/**
-	 * Handles arguments to ImageJ coming from an external source such as the
-	 * command line.
-	 */
+	/** Handles arguments from an external source such as the command line. */
 	void processArgs(String... args);
 
 	/** Adds a listener for output sent to {@code stdout} or {@code stderr}. */

src/main/java/org/scijava/display/event/input/MsButtonEvent.java

@@ -43,8 +43,8 @@
 public abstract class MsButtonEvent extends MsEvent {
 
 	// TODO - Use an enum for the buttons. Perhaps an extensible enum (see Axis &
-	// Axes)? In util-awt, add a mechanism for mapping AWT mouse buttons to and
-	// from ImageJ mouse buttons (similar to AWTCursors).
+	// Axes)? In scijava-ui-awt, add a mechanism for mapping AWT mouse buttons to
+	// and from SciJava mouse buttons (similar to AWTCursors).
 
 	public static final int LEFT_BUTTON = 0;
 	public static final int MIDDLE_BUTTON = 1;

src/main/java/org/scijava/menu/MenuConstants.java

@@ -32,7 +32,7 @@
 package org.scijava.menu;
 
 /**
- * Useful constants when defining ImageJ menu entries.
+ * Useful constants when defining application menu entries.
  * 
  * @author Curtis Rueden
  */
@@ -43,9 +43,9 @@ private MenuConstants() {
 	}
 
 	// TODO - Finalize the location of these constants. The potential confusion is
-	// that ij-core supposedly provides a general-purpose extensibility framework,
-	// which could be used by applications other than ImageJ, except for these
-	// constants, which are very specific to the ImageJ user interface.
+	// that SciJava Common supposedly provides a general-purpose extensibility
+	// framework, which could be used by applications other than ImageJ, except
+	// for these constants, which are very specific to the ImageJ user interface.
 
 	public static final String FILE_LABEL = "File";
 	public static final String EDIT_LABEL = "Edit";

src/main/java/org/scijava/module/ModuleService.java

@@ -59,10 +59,10 @@
  * </p>
  * <p>
  * A <em>module</em> is distinct from a <em>plugin</em> in that plugins extend
- * ImageJ's functionality in some way, taking many forms, whereas modules are
- * always runnable code with typed inputs and outputs. There is a particular
- * type of plugin called a {@link org.scijava.command.Command} which is also a
- * module, but many plugins (e.g., {@link org.scijava.tool.Tool}s and
+ * a program's functionality in some way, taking many forms, whereas modules
+ * are always runnable code with typed inputs and outputs. There is a
+ * particular type of plugin called a {@link org.scijava.command.Command} which
+ * is also a module, but many plugins (e.g., {@link org.scijava.tool.Tool}s and
  * {@link org.scijava.display.Display}s) are not modules.
  * </p>
  *