From 2e906b255747c4a32e8479e5cc44a986dfd57a9e Mon Sep 17 00:00:00 2001
From: Ehsan ESTAJI <71376358+ehsanestaji@users.noreply.github.com>
Date: Mon, 18 May 2026 21:03:24 +0200
Subject: [PATCH] chore: align Bioconda recipe starter

---
 packaging/bioconda/build.sh           |  5 +++--
 packaging/bioconda/meta.yaml          |  4 ----
 tests/python/test_release_metadata.py | 11 +++++++++++
 3 files changed, 14 insertions(+), 6 deletions(-)

diff --git a/packaging/bioconda/build.sh b/packaging/bioconda/build.sh
index 38b08ee..f3ba6f7 100755
--- a/packaging/bioconda/build.sh
+++ b/packaging/bioconda/build.sh
@@ -5,7 +5,8 @@ cargo-bundle-licenses --format yaml --output THIRDPARTY.yml
 cargo install -v --locked --no-track --root "${PREFIX}" --path .
 rm -f "${PREFIX}/.crates.toml" "${PREFIX}/.crates2.json"
 
-install -Dm644 schema/fastaguard.schema.json \
+mkdir -p "${PREFIX}/share/${PKG_NAME}/schema"
+install -m644 schema/fastaguard.schema.json \
   "${PREFIX}/share/${PKG_NAME}/schema/fastaguard.schema.json"
-install -Dm644 schema/finding-catalog.json \
+install -m644 schema/finding-catalog.json \
   "${PREFIX}/share/${PKG_NAME}/schema/finding-catalog.json"
diff --git a/packaging/bioconda/meta.yaml b/packaging/bioconda/meta.yaml
index fed1d4f..64de0de 100644
--- a/packaging/bioconda/meta.yaml
+++ b/packaging/bioconda/meta.yaml
@@ -17,10 +17,6 @@ requirements:
     - {{ compiler('rust') }}
     - {{ compiler('c') }}
     - cargo-bundle-licenses
-  host:
-    - zlib
-  run:
-    - zlib
 
 test:
   commands:
diff --git a/tests/python/test_release_metadata.py b/tests/python/test_release_metadata.py
index f89e8c9..57e733a 100644
--- a/tests/python/test_release_metadata.py
+++ b/tests/python/test_release_metadata.py
@@ -30,6 +30,17 @@ def test_bioconda_recipe_sha256_is_real_hash(self):
         self.assertIsNotNone(match, recipe)
         self.assertNotIn("REPLACE_WITH_PUBLIC_SOURCE_ARCHIVE_SHA256", recipe)
 
+    def test_bioconda_recipe_avoids_unneeded_runtime_zlib(self):
+        recipe = (ROOT / "packaging" / "bioconda" / "meta.yaml").read_text()
+
+        self.assertNotIn("    - zlib", recipe)
+
+    def test_bioconda_build_script_uses_portable_install(self):
+        script = (ROOT / "packaging" / "bioconda" / "build.sh").read_text()
+
+        self.assertIn('mkdir -p "${PREFIX}/share/${PKG_NAME}/schema"', script)
+        self.assertNotIn("install -D", script)
+
 
 if __name__ == "__main__":
     unittest.main()