From 79082813b90e30232335ff886b2515887df14a53 Mon Sep 17 00:00:00 2001 From: Kieran O'Neill Date: Tue, 12 May 2026 17:11:43 -0700 Subject: [PATCH 1/2] Add samtools and star container for Hartwig workflow Added samtools and star versions to hash.tsv --- combinations/hash.tsv | 1 + 1 file changed, 1 insertion(+) diff --git a/combinations/hash.tsv b/combinations/hash.tsv index 79495267c..9244fc477 100644 --- a/combinations/hash.tsv +++ b/combinations/hash.tsv @@ -944,3 +944,4 @@ montreal-forced-aligner=3.3.8,python=3.13,zip=3.0 r-base=4.2.3,r-tidyverse=2.0.0,bioconductor-genomicranges=1.50.0,bioconductor-plyranges=1.18.0 python=3.9,pandas=1.5.3,openpyxl=3.0.9,numpy=1.21.0 r-susier=0.14.2,r-data.table=1.17.8 +samtools=1.21--h50ea8bc_0,star=2.7.3a--0 From 35e4874a2c879f585a7f0bbffd31ae454f52ac81 Mon Sep 17 00:00:00 2001 From: Kieran O'Neill Date: Wed, 13 May 2026 08:23:12 -0700 Subject: [PATCH 2/2] snip off hashes MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Thanks! Co-authored-by: Björn Grüning --- combinations/hash.tsv | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/combinations/hash.tsv b/combinations/hash.tsv index 9244fc477..349961080 100644 --- a/combinations/hash.tsv +++ b/combinations/hash.tsv @@ -944,4 +944,4 @@ montreal-forced-aligner=3.3.8,python=3.13,zip=3.0 r-base=4.2.3,r-tidyverse=2.0.0,bioconductor-genomicranges=1.50.0,bioconductor-plyranges=1.18.0 python=3.9,pandas=1.5.3,openpyxl=3.0.9,numpy=1.21.0 r-susier=0.14.2,r-data.table=1.17.8 -samtools=1.21--h50ea8bc_0,star=2.7.3a--0 +samtools=1.21,star=2.7.3a