From e4329b5f989331997ca71e0268830244af404c1d Mon Sep 17 00:00:00 2001 From: Saim Momin Date: Fri, 8 May 2026 17:15:05 +0200 Subject: [PATCH 1/2] Add container pecat:0.0.3 with medaka and clair3 dependencies --- combinations/hash.tsv | 1 + 1 file changed, 1 insertion(+) diff --git a/combinations/hash.tsv b/combinations/hash.tsv index 79495267c..d3c134841 100644 --- a/combinations/hash.tsv +++ b/combinations/hash.tsv @@ -944,3 +944,4 @@ montreal-forced-aligner=3.3.8,python=3.13,zip=3.0 r-base=4.2.3,r-tidyverse=2.0.0,bioconductor-genomicranges=1.50.0,bioconductor-plyranges=1.18.0 python=3.9,pandas=1.5.3,openpyxl=3.0.9,numpy=1.21.0 r-susier=0.14.2,r-data.table=1.17.8 +pecat=0.0.3,medaka=1.12.1,clair3=2.0.1 \ No newline at end of file From b0316b93774fb03346b74ebb0ccab2fe3395c634 Mon Sep 17 00:00:00 2001 From: Saim Momin Date: Fri, 8 May 2026 17:31:49 +0200 Subject: [PATCH 2/2] Add pecat dependencies --- combinations/hash.tsv | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/combinations/hash.tsv b/combinations/hash.tsv index d3c134841..3f3e696ad 100644 --- a/combinations/hash.tsv +++ b/combinations/hash.tsv @@ -944,4 +944,5 @@ montreal-forced-aligner=3.3.8,python=3.13,zip=3.0 r-base=4.2.3,r-tidyverse=2.0.0,bioconductor-genomicranges=1.50.0,bioconductor-plyranges=1.18.0 python=3.9,pandas=1.5.3,openpyxl=3.0.9,numpy=1.21.0 r-susier=0.14.2,r-data.table=1.17.8 -pecat=0.0.3,medaka=1.12.1,clair3=2.0.1 \ No newline at end of file +pecat=0.0.3,medaka=1.12.1,clair3=2.0.1 +pecat=0.0.3,medaka=1.7.2,clair3=v0.1-r12 \ No newline at end of file